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Apply a logarithmic transformation to the data to stabilize the variance.

Usage

transform(dataSet, logFold = 2)

Arguments

dataSet

A data frame containing the data signals.

logFold

An integer specifying the base for the log transformation.

Value

The transformed data.

Details

The function executes the following:

  1. Plots the mean-variance relationship using meanVariancePlot().

  2. Log-transforms the data, using the specified base.

  3. Plots the mean-variance relationship again for comparison.