Volcano plot

Generate a volcano plot for the data.

Usage

visualize.volcano(dataSet, P.thres = 0.05, F.thres = 1)

Arguments

dataSet

The data set corresponds to the output from the function analyze.mod_t, analyze.t, or analyze.wilcox.

P.thres

A numeric value (default = 0.05) specifying the p-value threshold used to draw the horizontal line at -log10(P.thres) on the volcano plot.

F.thres

threshold (default = 1) specifying the absolute fold change threshold used to draw the vertical lines at -F.thres and F.thres on the volcano plot.

Value

An object of class ggplot.